It happened around 11:30 a.m. in the 400 block of East Branch Street.
According to the Johnston County Sheriff's Office, deputies were serving a warrant along with the SBI, the Bureau of Alcohol, Tobacco and Firearms and the Harnett County Sheriff's Office when a Johnston County deputy fired at a suspect.
That suspect was shot and taken to the hospital with what appear to be non-life threatening injuries.
Dozens of emergency personnel were at the scene.
This is a developing story.